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Vision4D / arivis Pro
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Vision4D / arivis Pro
Setting Up arivis Vision4D
Using arivis Vision4D
Imaging Basics
Tutorials
time-lapse analysis
Scripting and interaction with other programs
Vision4D Pipeline examples
Licensing setup
Machine learning and deep learning
Release Notes
VisionVR / arivis Pro VR
Tutorials
Using arivis VisionVR
System Requirements
Release Notes
SIS Converter
Using SIS Converter
Release Notes
Supported File Formats
Tutorials
APEER / arivis Cloud
Getting Started
AI Toolkit
Applications
Modules & Workflows
Software Ecosystem Integration
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arivis Knowledge Hub
Vision4D / arivis Pro
VisionHub / arivis Hub
Tutorial
Deployment Information
Videos and Presentations
Vision4D / arivis Pro
Setting Up arivis Vision4D
Using arivis Vision4D
Imaging Basics
Tutorials
time-lapse analysis
Scripting and interaction with other programs
Vision4D Pipeline examples
Licensing setup
Machine learning and deep learning
Release Notes
VisionVR / arivis Pro VR
Tutorials
Using arivis VisionVR
System Requirements
Release Notes
SIS Converter
Using SIS Converter
Release Notes
Supported File Formats
Tutorials
APEER / arivis Cloud
Getting Started
AI Toolkit
Applications
Modules & Workflows
Software Ecosystem Integration
Vision4D / arivis Pro
Scientific Image Visualization and Analysis
Setting Up arivis Vision4D
Choosing the right hardware for arivis Pro (Vision4D)
How to «Activate a product license»
Using the GPU Package Installation for arivis Vision4D
How to : «Run V4D on a laptop»
arivis software products and Virtual Machines
How to: arivis Vision4D on Amazon AWS
Using arivis Vision4D over Remote Desktop
How to: install arivis Vision4D on Apple hardware
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Using arivis Vision4D
Getting started with arivis Vision4D
How to : «Calibrate an image»
How to use : «Intensity range and visualization setting»
How can I measure distances in an images?
How to use local Deep Learning with the arivis AI toolkit
How to: « Set Opacity in 3D rendering »
How to color volumes by depth in 3D view
How do I export CSV files out of arivis Vision4D?
Background Subtraction vs Shading correction
How to: «Drawing objects interactively»
How to : «Configure the Result Storage operator»
How to perform : «SIS file optimization»
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Imaging Basics
What is an image?
What is resolution
What is segmentation
How does arivis handle large datasets
How does arivis render datasets that are larger than the video memory in 3D?
Why does processing a 3D animation movie export take so long?
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Tutorials
arivis Vision4D Video Tutorials Library
How do I measure the ratio of objects inside other objects?
How to: Import and move objects in a 3D volume
How to perform : «the Compartmentalization analysis»
Use case: the Compartments operation
How to: Contextualise Segmentation to Atlas Regions
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time-lapse analysis
How to - Tracking in Vision4D
How to : «Change the time interval in a time series dataset»
How to perform : «Manual tracking on existing segments»
How to quantify contacts over time
Scripting and interaction with other programs
How to perform : «Contrast limited adaptive histogram equalization (CLAHE)»
Objects contacts analysis
Install Anaconda Python for Vision4D
Colour Deconvolution
How to create : «XYZ matrix of sub-volumes»
How to create : «Heat-Map – density distribution»
How to create : «Freely XY Oriented Sub Volumes»
How to perform : «Objects density (heat-map) and object distribution gradient plotting (profile)»
How to create : «Spiral Oriented Sub Volume»
How to create : «Concentric Sub Volume - Matryoshka Dolls»
How to create : «Spiral Oriented Sub Volume»
Converting Cellpose models for use in arivis
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Vision4D Pipeline examples
Sample Pipeline «Detect cells based on Membranes»
Sample Pipeline «Detect cells using seeded region growing»
Sample Pipeline: «Colocalize Particles»
Sample Pipeline «Detect big structures Auto»
Sample Pipeline «Compartmentalize cells or particles »
Sample Pipeline «Detect big structures Manual»
Sample Pipeline «Detect cells based on membranes with enhancement»
Sample Pipeline «Detect cells using seeded region growing»
Sample Pipeline «Detect cells or particles»
Sample Pipeline «Detect cells or particles using seeded region growing»
Sample Pipeline «Detect small, rounded, structures using Blob Finder
Sample Pipeline «Track cells or particles with lineage»
Sample pipeline: wound healing assays
Sample Pipeline «Detect small structures using watershed»
Sample Pipeline «Track cells or particles»
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Licensing setup
arivis Network License setup
HASP License Troubleshooting
Arivis Licensing - Activations, updates and transfers
Licenses configuration scenario
Arivis Vision4D licensing FAQ
Choosing the right license type for your arivis software
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Machine learning and deep learning
Using StarDist in arivis Vision4D
Applying Cellpose models in arivis Vision4D
Release Notes
arivis Vision4D 4.1 Release Notes March 2023
arivis Vision4D 4.0 Release Notes October 2022
arivis Vision4D 3.6.2 Release Notes June 2022
arivis Vision4D 3.6.1 Release Notes May 2022
arivis Vision4D 3.6 Release Notes February 2022
arivis Vision4D 3.5.1 Release Notes November 2021
arivis Vision4D 3.5 Release Notes August 2021
arivis Vision4D 3.4 Release Notes January 2021
arivis Vision4D 3.3 Release Notes July 2020
arivis Vision4D 3.2 Release Notes April 2020
arivis Vision4D 3.1.4 Release Notes February 2020
arivis Vision4D 3.1.3 Release Notes November 2019
arivis Vision4D 3.1.2 Release Notes October 2019
arivis Vision4D 3.0.1 Release Notes October 2018
arivis Vision4D 2.12.6 Release Notes August 2017
arivis Vision4D 2.12.5 Release Notes June 2017
arivis Vision4D 2.12.4 Release Notes December 2016
arivis Vision4D 2.12.3 Release Notes October 2016
arivis Vision4D 2.12.2 Release Notes June 2016
arivis Vision4D 2.12.1 Release Notes April 2016
arivis Vision4D 2.12 Release Notes January 2016
arivis Vision4D 2.11.2 Release Notes July 2015
arivis Vision4D 2.11 Release Notes April 2015
arivis Vision4D 4.1.1 Release Notes July 2023
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